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Metadata: Results of AquaNet-Mod for projecting the economic burden of the World Organisation for Animal Health (WOAH) listed diseases across English and Welsh Salmonid industry
Abstract:
The outputs of the Aquaculture Network Disease Model (AquaNet-Mod), predicting the epidemiological and economic burden of viral haemorrhagic septicaemia in English and Welsh salmonid farms under various disease control scenarios. Included are outputs of the AquaNet-Mod from FY22-23. The code for generating these outputs can be found at the `aquanet` and `aquanet-mod` GitHub repositories. For the summary data, there are .csv files which give the epidemic size, duration and cost for each simulation. For the epidemic size and duration, the files also give an indication as to whether an epidemic died out or timed out. The summary data contains five zipped output sub-files: ( 1.)scenarios - Contains the outputs of disease control scenarios described in Guilder et al. (in prep) and Kennerley et al. (in prep). ( 2.)fishery_cull - Contains the outputs of the baseline disease control scenario, with different proportions of fisheries able to cull. ( 3.)fallow_period - Contains the outputs of the baseline disease control scenario, with different lengths of fallow period. ( 4.)n_sims - Contains the outputs of baseline disease control scenario, with a different number of simulations. Note: doesn’t contain economic data. ( 5.)sensitivity_tests - Contains the outputs of model sensitivity tests described in Guilder et al. (in prep). .. _`aquanet`: https://github.com/CefasRepRes/aquanet .. _`aquanet-mod`: https://github.com/CefasRepRes/aquanet-mod
Data holder:
Centre for Environment, Fisheries and Aquaculture Science, Lowestoft Laboratory (CEFAS)
| Other details | ||
| Internal code | Internally assigned metadata identifier | 9077 |
| Title | The title is used to provide a brief and precise description of the dataset such as 'Date', 'Originating organisation/programme', 'Location' and 'Type of survey'. All acronyms and abbreviations should be reproduced in full. | Results of AquaNet-Mod for projecting the economic burden of the World Organisation for Animal Health (WOAH) listed diseases across English and Welsh Salmonid industry |
| File Identifier | The File Identifier is a code, preferably a GUID, that is globally unique and remains with the same metadata record even if the record is edited or transferred between portals or tools. | CEFAS0df11c37-c849-45f7-9eda-4194005fc838 |
| Resource Identifier | This is the code assigned by the data owner. | CEFAS21672 |
| Resource type | The resource type will likely be a dataset but could also be a series (collection of datasets with a common specification) or a service. | dataset |
| Start date | This describes the date the resource starts. This may only be the year if month and day are not known | 2020-04-01 |
| End date | This describes the date the resource ends. This may only be the year if month and day are not known | 2023-04-01 |
| Frequency of updates | This describes the frequency with which the resource is modified or updated i.e. a monitoring programme that samples once per year has a frequency that is described as 'annually'. | notPlanned |
| Abstract | The abstract provides a clear and brief statement of the content of the resource. | The outputs of the Aquaculture Network Disease Model (AquaNet-Mod), predicting the epidemiological and economic burden of viral haemorrhagic septicaemia in English and Welsh salmonid farms under various disease control scenarios. Included are outputs of the AquaNet-Mod from FY22-23. The code for generating these outputs can be found at the `aquanet` and `aquanet-mod` GitHub repositories. For the summary data, there are .csv files which give the epidemic size, duration and cost for each simulation. For the epidemic size and duration, the files also give an indication as to whether an epidemic died out or timed out. The summary data contains five zipped output sub-files: ( 1.)scenarios - Contains the outputs of disease control scenarios described in Guilder et al. (in prep) and Kennerley et al. (in prep). ( 2.)fishery_cull - Contains the outputs of the baseline disease control scenario, with different proportions of fisheries able to cull. ( 3.)fallow_period - Contains the outputs of the baseline disease control scenario, with different lengths of fallow period. ( 4.)n_sims - Contains the outputs of baseline disease control scenario, with a different number of simulations. Note: doesn’t contain economic data. ( 5.)sensitivity_tests - Contains the outputs of model sensitivity tests described in Guilder et al. (in prep). .. _`aquanet`: https://github.com/CefasRepRes/aquanet .. _`aquanet-mod`: https://github.com/CefasRepRes/aquanet-mod |
| Lineage | Lineage includes the background information, history of the sources of data, data quality statements and methods. | The salmonid aquaculture network (a network of sites in England and Wales which participate in salmonid aquaculture) is created from live fish movement records from the System for Tracking and Recording Fish and Shellfish database (STARFISH). STARFISH is a database that is used by the Fish health inspectorate (FHI) at cefas to track live fish movements. River network and catchment shapefiles were taken from the Environment Agency. Model parameterisation was from various sources contained within Guilder et al. (in prep) and Kennerley et al. (in prep). |
| Related keywords | ||
| Keyword | General subject area(s) associated with the resource, uses multiple controlled vocabularies | Aquaculture |
| General subject area(s) associated with the resource, uses multiple controlled vocabularies | Economics | |
| General subject area(s) associated with the resource, uses multiple controlled vocabularies | Fish | |
| General subject area(s) associated with the resource, uses multiple controlled vocabularies | Statistical units | |
| General subject area(s) associated with the resource, uses multiple controlled vocabularies | Inapplicable | |
| General subject area(s) associated with the resource, uses multiple controlled vocabularies | Marine Environmental Data and Information Network | |
| General subject area(s) associated with the resource, uses multiple controlled vocabularies | data.gov.uk | |
| Geographical coverage | ||
| North | The northern-most limit of the data resource in decimal degrees | 55.25 |
| East | The eastern-most limit of the data resource in decimal degrees | 3 |
| South | The southern-most limit of the data resource in decimal degrees | 50.5 |
| West | The western-most limit of the data resource in decimal degrees | -7 |
| Responsible organisations | ||
| Role | The point of contact is person or organisation with responsibility for the creation and maintenance of the metadata for the resource. | pointOfContact |
| Organisation name | Centre for Environment, Fisheries and Aquaculture Science, Lowestoft Laboratory (CEFAS) | |
| Delivery point | Cefas Lowestoft Laboratory, Pakefield Road | |
| Postal code | NR33 0HT | |
| City | Lowestoft | |
| Administrative area | Suffolk | |
| Country | UK | |
| data.manager@cefas.co.uk | ||
| Role | The originator is the person or organisation who created, collected or produced the resource. | originator |
| Organisation name | Centre for Environment, Fisheries and Aquaculture Science, Lowestoft Laboratory (CEFAS) | |
| Delivery point | Cefas Lowestoft Laboratory, Pakefield Road | |
| Postal code | NR33 0HT | |
| City | Lowestoft | |
| Administrative area | Suffolk | |
| Country | UK | |
| data.manager@cefas.co.uk | ||
| Role | The custodian is the person or organisation that accepts responsibility for the resource and ensures appropriate care and maintenance. If a dataset has been lodged with a Data Archive Centre for maintenance then this organisation is be entered here. | custodian |
| Organisation name | Centre for Environment, Fisheries and Aquaculture Science, Lowestoft Laboratory (CEFAS) | |
| Delivery point | Cefas Lowestoft Laboratory, Pakefield Road | |
| Postal code | NR33 0HT | |
| City | Lowestoft | |
| Administrative area | Suffolk | |
| Country | UK | |
| data.manager@cefas.co.uk | ||
| Role | The distributor is the person or organisation that distributes the resource. | distributor |
| Organisation name | Centre for Environment, Fisheries and Aquaculture Science, Lowestoft Laboratory (CEFAS) | |
| Delivery point | Cefas Lowestoft Laboratory, Pakefield Road | |
| Postal code | NR33 0HT | |
| City | Lowestoft | |
| Administrative area | Suffolk | |
| Country | UK | |
| data.manager@cefas.co.uk | ||
| Role | The owner is the person or organisation that owns the resource. | owner |
| Organisation name | Department for Environment, Food and Rural Affairs (DEFRA) | |
| defra.helpline@defra.gov.uk | ||
| Resource locators | ||
| Locator URL | Web address (URL) that links to the resource | https://data.cefas.co.uk/view/21672 |
| Locator name | Name of the web resource | Cefas Data Portal |
| Dataset constraints | ||
| 20.1 Limitations on Public Access - Access constraints | This states `otherRestrictions` from ISO vocabulary RestrictionCode and is an INSPIRE/GEMINI requirement. | otherRestrictions |
| 20.2 Limitations on Public Access - Other constraints | noLimitations | |
| 21.1 Conditions for Access and Use - Use constraints | This states `otherRestrictions` from ISO vocabulary RestrictionCode and is an INSPIRE/GEMINI requirement. | otherRestrictions |
| 21.2 Conditions for Access and Use - Other constraints | https://www.nationalarchives.gov.uk/doc/open-government-licence/version/3/ | |
| Version info | ||
| Date of publication | The publication date of the resource or if previously unpublished the date that the resource was made publicly available via the MEDIN network. | 2023-06-13 |
| Date of last revision | The most recent date that the resource was revised. | 2023-12-11 |
| Date of creation | The date that the resource was created. | 2023-05-02 |
| Harvest date | The date which this record has been (re)harvested from the provider. | 2026-04-19 |
| Metadata date | The date when the content of this metadata record was last updated. | 2023-12-11 |
| Metadata standard name | The name of the metadata standard used to create this metadata | MEDIN |
| Metadata standard version | The version of the MEDIN Discovery Metadata Standard used to create the metadata record | 3.1.1 |