0df5669d46645064885b95fcc5ccc733 English dataset Polly Hadžiabdić British Oceanographic Data Centre Head of the BODC Requests Team Joseph Proudman Building 6 Brownlow Street Liverpool Merseyside L3 5DA United Kingdom enquiries@bodc.ac.uk https://www.bodc.ac.uk/ pointOfContact 2025-06-09T15:21:05 MEDIN 3.1.2 urn:ogc:def:crs:EPSG::4326 OGP A study of adaptive radiation in an intertidal marine isopod in the North Atlantic, 2015-2016 British Oceanographic Data Centre record 1048_NE_M015661_1 2022-02-18 publication 2023-11-20 creation 2024-07-12 revision EDMED7076 http://www.bodc.ac.uk/ This dataset consists of the results of the genetic comparison of different species of the genus Jaera, a marine isopod, in the UK and USA. Jaera albifrons, J. forsmani, J. ischiosetosa, J. nordmanni and J. praehirsuta were collected from the underside of rocks at intertidal sites in the the UK. In the USA, J. posthirsuta, J. albifrons, J. ischiosetosa were similarly collected from sites in Maine and Massachusetts. Sample collection took place in 2015 and 2016. Sbf1 gene Restriction site Associated DNA (RAD) libraries were generated from total DNA using Illumina paired end DNA sequencing. In addition, individual microbiomes were characterised for Jaera albifrons, J. ischiosetosa, J. nordmanni, J. posthirsuta from UK populations using 16S rDNA metabarcode amplicon sequencing. The project aimed to assess parallel signatures of evolution across isolated populations and pinpoint regions of elevated genetic differentiation. All sampling and sequencing pipelines were undertaken by Marius Wenzel and Stuart Piertney (University of Aberdeen), with funding from NERC solo grant NE/M015661/1. Data are archived at the National Center for Biotechnology Information (NCBI). Unknown University of Aberdeen, School of Biological Sciences Unknown +44 (0)1224 272861 Zoology Building, Tillydrone Avenue Aberdeen Aberdeenshire AB24 2TZ United Kingdom marie.duncan@abdn.ac.uk http://www.abdn.ac.uk/biologicalsci/ owner Unknown University of Aberdeen, School of Biological Sciences Unknown +44 (0)1224 272861 Zoology Building, Tillydrone Avenue Aberdeen Aberdeenshire AB24 2TZ United Kingdom marie.duncan@abdn.ac.uk http://www.abdn.ac.uk/biologicalsci/ originator British Oceanographic Data Centre Director Joseph Proudman Building 6 Brownlow Street Liverpool Merseyside L3 5DA United Kingdom enquiries@bodc.ac.uk https://www.bodc.ac.uk/ custodian British Oceanographic Data Centre Director Joseph Proudman Building 6 Brownlow Street Liverpool Merseyside L3 5DA United Kingdom enquiries@bodc.ac.uk https://www.bodc.ac.uk/ distributor asNeeded Marine Environmental Data and Information Network Natural Environment Research Council Designated Data Centres MEDIN metadata record availability 2012-01-11 revision unknown SeaVoX Vertical Co-ordinate Coverages 2020-05-21 revision Species distribution GEMET - INSPIRE themes, version 1.0 2009-07-31 revision Molecular biology parameters SeaDataNet Parameter Discovery Vocabulary 2023-12-12 revision otherRestrictions No limitations apply Data are freely available to all following agreement to the terms and conditions of a Data Licence otherRestrictions Usage restrictions are specified in the terms of the licence English biota -71.012 2.659 42.297 57.672 SeaVoX water bodies 2024-12-11 revision North Sea SeaVoX water bodies 2024-12-11 revision Atlantic Ocean 2015-01-01 2016-12-31 Binary Delimited Text or Plaintext https://www.ncbi.nlm.nih.gov/bioproject/433614 Dataset Web Site Raw sequence reads held at NCBI information dataset COMMISSION REGULATION (EU) No 1089/2010 of 23 November 2010 implementing Directive 2007/2/EC of the European Parliament and of the Council as regards interoperability of spatial data sets and services 2010-12-08 publication BODC protocols are based on the Open Archival Information System (OAIS) model enabling BODC to iterate towards compliance with the on-going evolution and development of community requirements including FAIR (Findable,Accessible,Interoperable,Reusable), TRUST (Transparency, Responsibility, User community, Sustainability, Technology) and CARE (Collective Benefit, Authority to Control, Responsibility, Ethics). Data managers quality assure submissions and assemble the metadata necessary for curation. Submissions (as received) are placed in a long-term accession and stored in triplicate across multiple sites. Appropriate data are transferred into a standard internal format with source variable names mapped to controlled vocabularies, documentation assembled, and metadata loaded into BODC databases. Access to these data is through direct request, the BODC website and through partner repositories such as SeaDataNet. Access control is attained by assigning a data policy to each set of data and this policy is used to administer access when data are requested. Discovery metadata is aligned with EU INSPIRE (through MEDIN) and SeaDataNet community standards. Data are converted to open community formats including Ocean Data View ASCII and SeaDataNet NetCDF, with data described using terms from the NERC vocabulary server. BODC submission agreements are documented on the BODC website and customer service is assured with a dedicated requests team that serve data following local regulations including General Data Protection Regulation (GDPR) 2018 and Environmental Information Regulations (EIR) 2004. true This dataset was created by scientists at the University of Aberdeen School of Biological Sciences, following their in-house data processing and quality control procedures. The data were then archived at the National Center for Biotechnology and Information (NCBI), and the metadata were archived at the British Oceanographic Data Centre (BODC). BODC created the discovery metadata record which provides details of the dataset location at NCBI.Instrument(s) used to collect data: autoanalysers.