CEFASad9d2021-7281-44e5-80db-369ac15f2c61 English dataset Centre for Environment, Fisheries and Aquaculture Science, Lowestoft Laboratory (CEFAS) Cefas Lowestoft Laboratory Pakefield Road Lowestoft Suffolk NR33 0HT UK data.manager@cefas.co.uk pointOfContact 2025-04-11T12:53:13 EPSG Geodetic Parameter Registry 2022-01-07 revision WGS 84 Abundance of microlitter (including microplastics) in riverine samples (sediment, surface waters and biota) at selected locations across the Orange-Senqu River basin and associated land use data 2021 2024-08-23 publication 2025-04-11 revision 2024-08-22 creation CEFAS22014 https://data.cefas.co.uk Abundance data of microlitter (including microplastics) in riverine samples (sediment, surface waters and biota) were collected at selected locations across the Orange-Senqu River basin and associated land use in 2021. The file entitled 'List microlitter biota' presents the abundance of microplastics in riverine biota at selected locations across the Orange-Senqu River basin. The file entitled 'List microlitter sediment' presents the abundance of microplastics in riverine sediments at selected locations across the Orange-Senqu River basin. The file entitled 'List microlitter surface waters' presents the abundance of microplastics in riverine surface waters at selected locations across the Orange-Senqu River basin. The file entitled 'LU' summarises the local watershed traits including population density, land use, rainfall and flows. Centre for Environment, Fisheries and Aquaculture Science, Lowestoft Laboratory (CEFAS) Cefas Lowestoft Laboratory Pakefield Road Lowestoft Suffolk NR33 0HT UK data.manager@cefas.co.uk originator Centre for Environment, Fisheries and Aquaculture Science, Lowestoft Laboratory (CEFAS) Cefas Lowestoft Laboratory Pakefield Road Lowestoft Suffolk NR33 0HT UK data.manager@cefas.co.uk custodian Centre for Environment, Fisheries and Aquaculture Science, Lowestoft Laboratory (CEFAS) Cefas Lowestoft Laboratory Pakefield Road Lowestoft Suffolk NR33 0HT UK data.manager@cefas.co.uk distributor Department for Environment, Food and Rural Affairs (DEFRA) defra.helpline@defra.gov.uk owner notPlanned Fish SeaDataNet P03 parameter discovery vocabulary 2011-03-25 revision Freshwater ecosystem Freshwater monitoring Freshwater pollution Human impacts Laboratory experiment GEMET, version 1.0 2008-06-01 publication Micro-litter in sediments SeaDataNet P02 parameter discovery vocabulary 2011-03-25 revision Habitats and biotopes GEMET - INSPIRE themes, version 1.0 2008-06-01 publication Unknown SeaVoX Vertical Co-ordinate Coverages 2010-05-18 revision Marine Environmental Data and Information Network MEDIN metadata record availability 2012-01-11 publication data.gov.uk MEDIN metadata record availability 2012-01-11 publication otherRestrictions noLimitations otherRestrictions Public data - no limitations to reuse English environment 10.00 30.00 -40.00 -20.00 2021-10-04 2021-10-15 Binary Delimited Geographic Information System Unknown https://data.cefas.co.uk/view/22014 Cefas Data Portal download The Cefas Data Portal contains metadata records and data sets available to download and connect to in support of our commitment to open science. Data is available in the following formats: Binary download, CSV, ESRI Shapefile. The data can also be accessed via the WFS and WMS protocols. dataset INSPIRE Data Specification on Habitats and Biotopes – Technical Guidelines 2013-12-10 publication false See the referenced specification Commission Regulation (EU) No 1089/2010 of 23 November 2010 implementing Directive 2007/2/EC of the European Parliament and of the Council as regards interoperability of spatial data sets and services 2010-12-08 publication true See the referenced specification The riverine sediment samples were analysed using a LUMOS II Fourier transform infrared spectroscopy (FTIR) microscope with focal plane array (FPA) detector (Bruker, UK) at the Cefas microplastics laboratory. Dried sediments were digested using the dropwise addition of filtered (0.2 μm) H2O2 (30%). Following digestion, density separation used a 1.5 g.mL-1 solution of ZnCl2 . Centrifugated supernatant was transferred to a previously cleaned filtration unit and filtered using a 25 mm diameter 0.2 μm porosity Whatman Anodisc (VWR, UK). Each filter was then carefully transferred to previously cleaned glass petri dish and transported to a drying cabinet for drying under 50 °C prior to analysis using a LUMOS II micro-FTIR with FPA detector (Bruker, UK). FTIR spectra were collected using FPA detector in transmission mode using a single scan in the range 4000-1300 cm-1 at a resolution of 8 cm-1 using a 4x4 binning (limit of detection [LOD] ~20 μm). Spectra were converted using a macro in Bruker OPUS (version 8.5) and particle identification was carried out using the siMPle software developed by Aalborg University (Denmark). The riverine water samples were vacuum filtered and stained with Nile Red solution for 30 minutes. Visual examination of filters under a Leica MZ10F with GXCAM-U3PRO-20 camera attachment microscope using both blue and white light was conducted. A subset of suspected microlitter was identified for confirmation and polymer identification using a LUMOS II micro-FTIR. The riverine biota samples were chemically digested using a 30% KOH:NaClO v:v solution. Beakers were sonicated for 5 minutes (VWR ultrasonic cleaner, T2020SX26782) and placed in an incubator shaker (VWR incubating mini shaker, 980151UK) at 40 °C, 50 rpm for three days. On the fourth day, 40 mL of degreaser (Elbow Grease all-purpose degreaser) was added to each beaker and incubated for a further 24 hours. Following digestion, filtration, visual examination, and FTIR analysis of digested fish was completed in the same manner as surface water samples. Each item was imaged in GXCapture-T software (version x64, 4.10.16968.20200415). The second file (LU) containing the most recent land cover data (updated in 2020) for South Africa were extracted from the Department of Forestry, Fisheries, and the Environment (DFFE) open source South African National Land Cover database ( `https://egis.environment.gov.za/sa_national_land_cover_datasets`_). The database has 73 land cover classes which were reclassified using the ‘reclass’ tool in ArcGIS into six land use types: agriculture, industrial, natural and plantation, semi-urban, urban, and waterbody .. _`https://egis.environment.gov.za/sa_national_land_cover_datasets`: https://egis.environment.gov.za/sa_national_land_cover_datasets MEDIN 3.1.1