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Metadata: Virus shedding and food consumption in KHV challenged Carp
Abstract:
The dataset details feeding behaviour and mucus virus titres of 20 Carp challenged with Koi Herpes Virus (KHV). More specifically, 20 carp were bath challenged with KHV (E1-E20) for four hours at 23 degrees Celsius. Five control carp were mock challenged under the same conditions (CA-CE). KHV challenged and control fish were maintained in separate locations but under the same conditions. Fish were fed up to 40 food pellets daily and the number of uneaten pellets counted each day. In addition each fish was netted daily and samples of mucus collected by cutting out sections of net containing mucus and placing in centrifuge tubes. Viral titres in mucus were quantified using real time PCR. Fish were held until they either succumbed to the disease or were terminally anaesthetised when moribund. Survivors were terminally anaesthetised with benzocaine.
Data holder:
Centre for Environment, Fisheries and Aquaculture Science, Lowestoft Laboratory (CEFAS)
| Other details | ||
| Internal code | Internally assigned metadata identifier | 9514 |
| Title | The title is used to provide a brief and precise description of the dataset such as 'Date', 'Originating organisation/programme', 'Location' and 'Type of survey'. All acronyms and abbreviations should be reproduced in full. | Virus shedding and food consumption in KHV challenged Carp |
| File Identifier | The File Identifier is a code, preferably a GUID, that is globally unique and remains with the same metadata record even if the record is edited or transferred between portals or tools. | CEFAS3e90b032-4777-4a84-8d0f-29cfa62f7d7a |
| Resource Identifier | This is the code assigned by the data owner. | CEFAS19072 |
| Resource type | The resource type will likely be a dataset but could also be a series (collection of datasets with a common specification) or a service. | dataset |
| Start date | This describes the date the resource starts. This may only be the year if month and day are not known | 2011-08-01 |
| End date | This describes the date the resource ends. This may only be the year if month and day are not known | 2012-07-02 |
| Frequency of updates | This describes the frequency with which the resource is modified or updated i.e. a monitoring programme that samples once per year has a frequency that is described as 'annually'. | notPlanned |
| Abstract | The abstract provides a clear and brief statement of the content of the resource. | The dataset details feeding behaviour and mucus virus titres of 20 Carp challenged with Koi Herpes Virus (KHV). More specifically, 20 carp were bath challenged with KHV (E1-E20) for four hours at 23 degrees Celsius. Five control carp were mock challenged under the same conditions (CA-CE). KHV challenged and control fish were maintained in separate locations but under the same conditions. Fish were fed up to 40 food pellets daily and the number of uneaten pellets counted each day. In addition each fish was netted daily and samples of mucus collected by cutting out sections of net containing mucus and placing in centrifuge tubes. Viral titres in mucus were quantified using real time PCR. Fish were held until they either succumbed to the disease or were terminally anaesthetised when moribund. Survivors were terminally anaesthetised with benzocaine. |
| Lineage | Lineage includes the background information, history of the sources of data, data quality statements and methods. | The data were collected to provide insight into the likelihood of infected carp being caught (correlated with feeding rate) and contaminating angling equipment with virus (linked to virus titres in mucus). These data were collected during an experiment which was conducted as part of a larger study. The aim of this study was to develop a quantitative risk assessment framework by which to assess the risk of KHV transmission occurring on angling nets. The study report contains further information on the experiment as well as details of the other elements of the project. |
| Related keywords | ||
| Keyword | General subject area(s) associated with the resource, uses multiple controlled vocabularies | Advice |
| General subject area(s) associated with the resource, uses multiple controlled vocabularies | Analysis | |
| General subject area(s) associated with the resource, uses multiple controlled vocabularies | Animal experiment | |
| General subject area(s) associated with the resource, uses multiple controlled vocabularies | Risk assessment | |
| General subject area(s) associated with the resource, uses multiple controlled vocabularies | Laboratory test | |
| General subject area(s) associated with the resource, uses multiple controlled vocabularies | Freshwater organism | |
| General subject area(s) associated with the resource, uses multiple controlled vocabularies | Virus abundance in water bodies | |
| General subject area(s) associated with the resource, uses multiple controlled vocabularies | Fish disease and parasites | |
| General subject area(s) associated with the resource, uses multiple controlled vocabularies | Disease, damage and mortality | |
| General subject area(s) associated with the resource, uses multiple controlled vocabularies | Species distribution | |
| General subject area(s) associated with the resource, uses multiple controlled vocabularies | Unknown | |
| General subject area(s) associated with the resource, uses multiple controlled vocabularies | Marine Environmental Data and Information Network | |
| General subject area(s) associated with the resource, uses multiple controlled vocabularies | data.gov.uk | |
| Geographical coverage | ||
| North | The northern-most limit of the data resource in decimal degrees | 52.4595 |
| East | The eastern-most limit of the data resource in decimal degrees | 1.74086 |
| South | The southern-most limit of the data resource in decimal degrees | 52.4581 |
| West | The western-most limit of the data resource in decimal degrees | 1.73881 |
| Responsible organisations | ||
| Role | The point of contact is person or organisation with responsibility for the creation and maintenance of the metadata for the resource. | pointOfContact |
| Organisation name | Centre for Environment, Fisheries and Aquaculture Science, Lowestoft Laboratory (CEFAS) | |
| Delivery point | Cefas Lowestoft Laboratory, Pakefield Road | |
| Postal code | NR33 0HT | |
| City | Lowestoft | |
| Administrative area | Suffolk | |
| Country | UK | |
| data.manager@cefas.co.uk | ||
| Role | The originator is the person or organisation who created, collected or produced the resource. | originator |
| Organisation name | Centre for Environment, Fisheries and Aquaculture Science, Lowestoft Laboratory (CEFAS) | |
| Delivery point | Cefas Lowestoft Laboratory, Pakefield Road | |
| Postal code | NR33 0HT | |
| City | Lowestoft | |
| Administrative area | Suffolk | |
| Country | UK | |
| data.manager@cefas.co.uk | ||
| Role | The custodian is the person or organisation that accepts responsibility for the resource and ensures appropriate care and maintenance. If a dataset has been lodged with a Data Archive Centre for maintenance then this organisation is be entered here. | custodian |
| Organisation name | Centre for Environment, Fisheries and Aquaculture Science, Lowestoft Laboratory (CEFAS) | |
| Delivery point | Cefas Lowestoft Laboratory, Pakefield Road | |
| Postal code | NR33 0HT | |
| City | Lowestoft | |
| Administrative area | Suffolk | |
| Country | UK | |
| data.manager@cefas.co.uk | ||
| Role | The distributor is the person or organisation that distributes the resource. | distributor |
| Organisation name | Centre for Environment, Fisheries and Aquaculture Science, Lowestoft Laboratory (CEFAS) | |
| Delivery point | Cefas Lowestoft Laboratory, Pakefield Road | |
| Postal code | NR33 0HT | |
| City | Lowestoft | |
| Administrative area | Suffolk | |
| Country | UK | |
| data.manager@cefas.co.uk | ||
| Role | The owner is the person or organisation that owns the resource. | owner |
| Organisation name | Department for Environment, Food and Rural Affairs (DEFRA) | |
| defra.helpline@defra.gov.uk | ||
| Resource locators | ||
| Locator URL | Web address (URL) that links to the resource | https://data.cefas.co.uk/view/19072 |
| Locator name | Name of the web resource | Cefas Data Portal |
| Dataset constraints | ||
| 20.1 Limitations on Public Access - Access constraints | This states `otherRestrictions` from ISO vocabulary RestrictionCode and is an INSPIRE/GEMINI requirement. | otherRestrictions |
| 20.2 Limitations on Public Access - Other constraints | noLimitations | |
| 21.1 Conditions for Access and Use - Use constraints | This states `otherRestrictions` from ISO vocabulary RestrictionCode and is an INSPIRE/GEMINI requirement. | otherRestrictions |
| 21.2 Conditions for Access and Use - Other constraints | http://standards.iso.org/iso/19139/resources/gmxCodelists.xml#MD_RestrictionCode | |
| Version info | ||
| Date of publication | The publication date of the resource or if previously unpublished the date that the resource was made publicly available via the MEDIN network. | 2018-03-23 |
| Date of last revision | The most recent date that the resource was revised. | 2024-07-12 |
| Date of creation | The date that the resource was created. | 2018-03-22 |
| Harvest date | The date which this record has been (re)harvested from the provider. | 2026-04-19 |
| Metadata date | The date when the content of this metadata record was last updated. | 2024-07-12 |
| Metadata standard name | The name of the metadata standard used to create this metadata | MEDIN |
| Metadata standard version | The version of the MEDIN Discovery Metadata Standard used to create the metadata record | 3.1.1 |